Cell line name | SW982 | ||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Synonyms | SW-982; SW 982 | ||||||||||||||||||||||||||||||||
Accession | BTCC-1345 | ||||||||||||||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: SW982 (BTCC-1345) | ||||||||||||||||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Part of: MD Anderson Cell Lines Project. From: Scott and White Clinic; Temple; USA. Population: Caucasian. Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: Protein expression by reverse-phase protein arrays. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Caution: Stated to originate from a patient with a biphasic synovial sarcoma, however does not contain the SST-SSX1/SSX2 translocation which is typical of synovial sarcoma. Derived from site: In situ; Synovium; UBERON=UBERON_0007616. | ||||||||||||||||||||||||||||||||
Sequence variations |
| ||||||||||||||||||||||||||||||||
HLA typing | Source: PubMed=26589293
| ||||||||||||||||||||||||||||||||
Genome ancestry | Source: PubMed=30894373
| ||||||||||||||||||||||||||||||||
Disease | Biphasic synovial sarcoma (NCIt: C4279) Synovial sarcoma (ORDO: Orphanet_3273) | ||||||||||||||||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||||||||||||||||
Age at sampling | 25Y | ||||||||||||||||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||||||||||||||||
STR profile | Source(s): ATCC; CLS; Cosmic-CLP; PubMed=25877200 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||||||||||||||
Web pages | https://tcpaportal.org/mclp/ | ||||||||||||||||||||||||||||||||
Publications | PubMed=833871; DOI=10.1093/jnci/58.2.209 PubMed=3518877; DOI=10.3109/07357908609038260 DOI=10.1007/978-94-011-3550-4_4 PubMed=15038780; DOI=10.1290/1543-706X(2003)039<0337:pcoahs>2.0.CO;2 PubMed=20164919; DOI=10.1038/nature08768 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458 PubMed=25485619; DOI=10.1038/nbt.3080 PubMed=26351324; DOI=10.1158/1535-7163.MCT-15-0074 PubMed=26589293; DOI=10.1186/s13073-015-0240-5 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017 PubMed=28196595; DOI=10.1016/j.ccell.2017.01.005 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010 | ||||||||||||||||||||||||||||||||
Cross-references | |||||||||||||||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0009206 CCRID; 3101HUMTCHu209 Cell_Model_Passport; SIDM01161 Cosmic-CLP; 909759 DepMap; ACH-001274 IGRhCellID; SW982 LINCS_LDP; LCL-1880 | ||||||||||||||||||||||||||||||||
Anatomy/cell type resources | BTO; BTO:0006386 | ||||||||||||||||||||||||||||||||
Biological sample resources | BioSample; SAMN03471376 BioSample; SAMN03472764 | ||||||||||||||||||||||||||||||||
Cell line collections (Providers) | ATCC; HTB-93 BCRC; 60535 CLS; 300404 | ||||||||||||||||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308534 ChEMBL-Targets; CHEMBL2366238 GDSC; 909759 PharmacoDB; SW982_1552_2019 PubChem_Cell_line; CVCL_1734 | ||||||||||||||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54971230 | ||||||||||||||||||||||||||||||||
Experimental variables resources | EFO; EFO_0002378 |